Docs @ 30e7004

Author: MFC Action

documentation/architecture.html

@@ -429,7 +429,7 @@ <h1 class="doxsection"><a class="anchor" id="autotoc_md13"></a>
 <li><b>Add the module to <span class="tt">docs/module_categories.json</span></b> so it appears in this page</li>
 </ol>
 <p>Follow the pattern of existing modules like <span class="tt">m_body_forces</span> (simple) or <span class="tt">m_viscous</span> (more involved) as a template.</p>
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documentation/case_constraints.html

@@ -1500,7 +1500,7 @@ <h2 class="doxsection"><a class="anchor" id="physics-warnings"></a>
 </table>
 <hr  />
 <p>💡 <b>Tip:</b> If you encounter a validation error, check the relevant section above or review <a href="https://github.com/MFlowCode/MFC/blob/master/toolchain/mfc/case_validator.py"><span class="tt">case_validator.py</span></a> for complete validation logic.</p>
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documentation/cli-reference.html

@@ -991,7 +991,7 @@ <h3 class="doxsection"><a class="anchor" id="autotoc_md80"></a>
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 Debug Logging (<span class="tt">-d, --debug-log</span>)</h3>
 <p>Enables debug logging for the Python toolchain (mfc.sh internals). This is for troubleshooting the build system, not the MFC simulation code.</p>
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documentation/examples.html

@@ -630,7 +630,7 @@ <h3 class="doxsection"><a class="anchor" id="autotoc_md311"></a>
 <ul>
 <li>Papanastasiou, T. C. (1987). Flows of materials with yield. <em>J. Rheol.</em> 31, 385.</li>
 </ul>
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documentation/parameters.html

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 <div class="line"> </div>
 <div class="line"># Filter by type</div>
 <div class="line">./mfc.sh params -t real weno</div>
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documentation/physics_constraints.html

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 <li><code class="f90l">patch_icpp(i)%</code><code class="f90r">hcid</code>=hcid requires <span class="tt">files_dir</span> to be set</li>
 <li><code class="f90l">patch_icpp(i)%</code><code class="f90r">hcid</code>=hcid requires <span class="tt">file_extension</span> to be set</li>
 </ul>
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simulation/m__bubbles__EL_8fpp_8f90_source.html

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 <div class="ttc" id="anamespacem__bubbles__ee_html"><div class="ttname"><a href="namespacem__bubbles__ee.html">m_bubbles_ee</a></div><div class="ttdoc">Computes ensemble-averaged (Euler–Euler) bubble source terms for radius, velocity,...</div><div class="ttdef"><b>Definition</b> <a href="m__bubbles__EE_8fpp_8f90_source.html#l00323">m_bubbles_EE.fpp.f90:323</a></div></div>
 <div class="ttc" id="anamespacem__bubbles__ee_html_acdf857ad6b9f389ee1bd4dd81bbc23a5"><div class="ttname"><a href="namespacem__bubbles__ee.html#acdf857ad6b9f389ee1bd4dd81bbc23a5">m_bubbles_ee::s_initialize_bubbles_ee_module</a></div><div class="ttdeci">impure subroutine s_initialize_bubbles_ee_module</div><div class="ttdoc">Initialize the Euler-Euler bubble module.</div><div class="ttdef"><b>Definition</b> <a href="m__bubbles__EE_8fpp_8f90_source.html#l00376">m_bubbles_EE.fpp.f90:377</a></div></div>
 <div class="ttc" id="anamespacem__bubbles__el_html"><div class="ttname"><a href="namespacem__bubbles__el.html">m_bubbles_el</a></div><div class="ttdoc">Tracks Lagrangian bubbles and couples their dynamics to the Eulerian flow via volume averaging.</div><div class="ttdef"><b>Definition</b> <a href="m__bubbles__EL_8fpp_8f90_source.html#l00323">m_bubbles_EL.fpp.f90:323</a></div></div>
-<div class="ttc" id="anamespacem__bubbles__el_html_a00f224f76db49025f0c974450db5fb2f"><div class="ttname"><a href="namespacem__bubbles__el.html#a00f224f76db49025f0c974450db5fb2f">m_bubbles_el::s_write_lag_bubble_stats</a></div><div class="ttdeci">impure subroutine s_write_lag_bubble_stats()</div><div class="ttdoc">Write the maximum and minimum radius of each bubble.</div><div class="ttdef"><b>Definition</b> <a href="m__bubbles__EL_8fpp_8f90_source.html#l04759">m_bubbles_EL.fpp.f90:4760</a></div></div>
-<div class="ttc" id="anamespacem__bubbles__el_html_a380e92c53e3fc9298b7443a4fe7ac7af"><div class="ttname"><a href="namespacem__bubbles__el.html#a380e92c53e3fc9298b7443a4fe7ac7af">m_bubbles_el::s_write_restart_lag_bubbles</a></div><div class="ttdeci">impure subroutine s_write_restart_lag_bubbles(t_step)</div><div class="ttdoc">Write restart files for the Lagrangian bubble solver.</div><div class="ttdef"><b>Definition</b> <a href="m__bubbles__EL_8fpp_8f90_source.html#l04547">m_bubbles_EL.fpp.f90:4548</a></div></div>
+<div class="ttc" id="anamespacem__bubbles__el_html_a00f224f76db49025f0c974450db5fb2f"><div class="ttname"><a href="namespacem__bubbles__el.html#a00f224f76db49025f0c974450db5fb2f">m_bubbles_el::s_write_lag_bubble_stats</a></div><div class="ttdeci">impure subroutine s_write_lag_bubble_stats()</div><div class="ttdoc">Write the maximum and minimum radius of each bubble.</div><div class="ttdef"><b>Definition</b> <a href="m__bubbles__EL_8fpp_8f90_source.html#l04753">m_bubbles_EL.fpp.f90:4754</a></div></div>
+<div class="ttc" id="anamespacem__bubbles__el_html_a380e92c53e3fc9298b7443a4fe7ac7af"><div class="ttname"><a href="namespacem__bubbles__el.html#a380e92c53e3fc9298b7443a4fe7ac7af">m_bubbles_el::s_write_restart_lag_bubbles</a></div><div class="ttdeci">impure subroutine s_write_restart_lag_bubbles(t_step)</div><div class="ttdoc">Write restart files for the Lagrangian bubble solver.</div><div class="ttdef"><b>Definition</b> <a href="m__bubbles__EL_8fpp_8f90_source.html#l04541">m_bubbles_EL.fpp.f90:4542</a></div></div>
 <div class="ttc" id="anamespacem__bubbles__el_html_ac2feec1265bc9137083e18e9990f84d5"><div class="ttname"><a href="namespacem__bubbles__el.html#ac2feec1265bc9137083e18e9990f84d5">m_bubbles_el::q_beta</a></div><div class="ttdeci">type(scalar_field), dimension(:), allocatable q_beta</div><div class="ttdoc">Projection of the lagrangian particles in the Eulerian framework.</div><div class="ttdef"><b>Definition</b> <a href="m__bubbles__EL_8fpp_8f90_source.html#l00441">m_bubbles_EL.fpp.f90:441</a></div></div>
 <div class="ttc" id="anamespacem__bubbles__el_html_ad918924d606b49b86b473bf86143e233"><div class="ttname"><a href="namespacem__bubbles__el.html#ad918924d606b49b86b473bf86143e233">m_bubbles_el::intfc_rad</a></div><div class="ttdeci">real(wp), dimension(:,:), allocatable intfc_rad</div><div class="ttdoc">Bubble radius.</div><div class="ttdef"><b>Definition</b> <a href="m__bubbles__EL_8fpp_8f90_source.html#l00378">m_bubbles_EL.fpp.f90:378</a></div></div>
 <div class="ttc" id="anamespacem__cbc_html"><div class="ttname"><a href="namespacem__cbc.html">m_cbc</a></div><div class="ttdoc">Characteristic boundary conditions (CBC) for slip walls, non-reflecting subsonic inflow/outflow,...</div><div class="ttdef"><b>Definition</b> <a href="m__cbc_8fpp_8f90_source.html#l00334">m_cbc.fpp.f90:334</a></div></div>