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Add Qwen 3.5 multi-axis VLM pruning campaign - #2348

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Add Qwen 3.5 multi-axis VLM pruning campaign#2348
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@j-rausch j-rausch commented Sep 6, 2026

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What does this PR do?

The Qwen 3.5 0.8B example had grown to 13 overlapping run recipes, including separate extended, quality-comparison, and lifecycle variants. Their responsibilities and configuration were duplicated, so it was unclear which recipe to use for a quick integration check or a complete campaign.

This PR reduces that surface to three entry points: one complete lifecycle smoke per modality and one illustrative VLM campaign. The shared bounded-search settings remain reusable implementation details rather than separate MIP-only recipes.

Recipe consolidation

  • Removes the MIP-only, extended, quality-comparison, and duplicate lifecycle recipes.
  • Replaces the overlapping orchestration profiles with a shared single-GPU profile for smokes and one model-specific profile for the campaign.
  • Consolidates the Qwen example documentation around the remaining recipes and removes the redundant campaign guide.

Multi-axis campaign

  • Searches hidden width, heterogeneous FFN width, depth, grouped-attention geometry, and GDN geometry under parameter constraints.
  • Screens candidates with image-text LM loss, materializes the retained checkpoints, evaluates them before and after a 128-step KD example, and selects one using the configured RealWorldQA/MMMU aggregate rank.
  • Extends MIP configuration with layer-scoped axis choices and diverse solution pools, while generated bundles preserve inspected model dimensions and route metadata-only work to CPU resources.

Evidence boundary

Every remaining recipe is compiled in unit tests to catch configuration, stage, and resource drift. The current campaign has not been run end to end. Retained historical measurements used earlier recipes, so they do not establish the performance of this campaign. The KD budget and selection rule are example settings, not recommended defaults.

Testing

Focused and broader Puzzletron unit tests and repository checks passed. One host-specific atomic-directory-exchange test was skipped because that capability is unavailable. No GPU campaign was run for this change.

Summary by CodeRabbit

  • New Features
    • Added maintained Qwen 3.5 VLM lifecycle and multi-axis pruning examples with dataset preparation, distillation, evaluation, serving, and resume support.
    • Added layer-specific pruning selectors, Mamba group-axis support, and CPU resource configuration for Slurm workflows.
    • Improved dry-run previews, validation, bundle recovery, and checkpoint compatibility checks.
  • Documentation
    • Streamlined setup, orchestration, campaign, VLM, launch, resume, and troubleshooting guidance.
  • Updates
    • Consolidated Qwen 3.5 workflows around maintained smoke and campaign configurations, replacing legacy campaign variants.

@j-rausch j-rausch added the puzzletron_v2 Related to feature/puzzletron_v2 branch label Sep 6, 2026
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📒 Files selected for processing (6)
  • tests/gpu/torch/puzzletron/test_qwen3p5_0p8b_vlm_smoke.py
  • tests/unit/torch/puzzletron/test_mip_search_space.py
  • tests/unit/torch/puzzletron/test_qwen3p5_0p8b_example.py
  • tests/unit/torch/puzzletron/test_qwen3p5_0p8b_full_vlm_smoke_plan.py
  • tests/unit/torch/puzzletron/test_setup_v2_quick.py
  • tests/unit/torch/puzzletron/test_setup_v2_resolved_config.py
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  • tests/unit/torch/puzzletron/test_qwen3p5_0p8b_full_vlm_smoke_plan.py
  • tests/unit/torch/puzzletron/test_setup_v2_quick.py

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📝 Walkthrough

Walkthrough

The PR replaces Qwen 3.5 0.8B campaign examples with VLM dataset preparation, multi-axis pruning, candidate evaluation, distillation, serving, and resume support. It also adds CPU resource routing, setup validation, atomic bundle publication, and focused tests.

Changes

Qwen 3.5 VLM campaign

Layer / File(s) Summary
Campaign configuration and execution flow
examples/puzzletron/configs/families/qwen3_5/..., examples/puzzletron/configs/orchestration/..., examples/puzzletron/docs/..., examples/puzzletron/README.md
The VLM campaign adds pinned datasets, multi-axis MIP search, candidate materialization, short global KD, evaluation selection, serving, dry-run guidance, and resume instructions.
Search-space and evaluator implementation
modelopt/torch/puzzletron/mip/search_space.py, examples/puzzletron/evaluation/vlm/*
Layer-scoped selectors and mamba.num_groups are supported. VLM evaluation paths share single-run validation and profile-based suite resolution.
Named MIP validation and resource rendering
puzzletron_setup/bundle.py
Named MIP generation validates teacher geometry, preserves hidden-width information, selects CPU or GPU resources, and records execution metadata in dry-run plans.
CPU defaults and atomic bundle publication
puzzletron_setup/v2/*
Setup v2 adds CPU Slurm fields and prompts. Bundle publication generates final dry-run plans atomically and restores previous files if publication fails.
Campaign and setup validation
tests/unit/torch/puzzletron/*, tests/gpu/torch/puzzletron/*
Tests cover search-space selectors, campaign axes, candidate generation, CPU routing, teacher geometry, evaluator metadata, resource rendering, and bundle rollback.

Assessment at a7ec4

Estimated code review effort: 4 (Complex) | ~60 minutes

Change: Feature · Severity of issue fixed: Low

Merge Risk: 🔵 Low

The updated campaign and setup workflow is largely covered, but one lightweight orchestration test may check the wrong validation diagnostic. This is a bounded test-contract risk that should be corrected before relying on that coverage.

Possibly related PRs


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❌ Failed checks (1 error, 1 warning)

Check name Status Explanation Resolution
Security Anti-Patterns ❌ Error CRITICAL security anti-patterns are introduced. The diff adds four # nosec bypass comments in modelopt/torch/puzzletron/benchmarks/aiperf.py and `modelopt/torch/puzzletron/subblock_stats/runtime_v… Remove all newly added # nosec comments and address the underlying Bandit findings without bypasses. Replace each weights_only=False load with weights_only=True or add an inline comment that explicitly confirms the file is internally …
Docstring Coverage ⚠️ Warning Docstring coverage is 25.30% which is insufficient. The required threshold is 80.00%. Docstring coverage is scoped to functions touched by this diff. Analyzed 83 functions across 21 files. Write docstrings for the functions missing them to satisfy the coverage threshold.
✅ Passed checks (4 passed)
Check name Status Explanation
Description Check ✅ Passed Check skipped - CodeRabbit’s high-level summary is enabled.
Title check ✅ Passed The title clearly and concisely describes the main change: adding a Qwen 3.5 multi-axis VLM pruning campaign.
Linked Issues check ✅ Passed Check skipped because no linked issues were found for this pull request.
Out of Scope Changes check ✅ Passed Check skipped because no linked issues were found for this pull request.
Full details: Security Anti-Patterns

Explanation

CRITICAL security anti-patterns are introduced. The diff adds four # nosec bypass comments in modelopt/torch/puzzletron/benchmarks/aiperf.py and modelopt/torch/puzzletron/subblock_stats/runtime_vllm.py; the PR description contains no required codeowner approval or justification. It also adds torch.load(..., weights_only=False) without inline safety comments in modelopt/torch/puzzletron/bypass_distillation/checkpointing.py:106,138 and modelopt/torch/puzzletron/utils/data/dataloaders.py:545. It hardcodes trust_remote_code=True for model, tokenizer, and processor loading in modelopt/torch/puzzletron/campaigns/preflight.py:159,219,230, plus related loading paths in modelopt/torch/puzzletron/plugins/automodel/patch.py:222 and examples/puzzletron/run_axis_diagnostic_worker.py:74. These are changed-code matches to explicit failure conditions.

Resolution

Remove all newly added # nosec comments and address the underlying Bandit findings without bypasses. Replace each weights_only=False load with weights_only=True or add an inline comment that explicitly confirms the file is internally generated and trusted; use a safe, non-pickle cache format where the validation dataset cache is not trusted. Replace every hardcoded trust_remote_code=True with a caller/configuration-controlled option that defaults to False, and validate trusted sources before enabling it. If any security exception remains necessary, obtain the required @NVIDIA/modelopt-setup-codeowners approval and record the explicit justification in the PR description.

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 62.47%. Comparing base (92a4c3e) to head (a7ec4bc).
⚠️ Report is 3 commits behind head on jrausch/qwen35-vlm-engine-stack.

Additional details and impacted files
@@                         Coverage Diff                         @@
##           jrausch/qwen35-vlm-engine-stack    #2348      +/-   ##
===================================================================
+ Coverage                            62.27%   62.47%   +0.19%     
===================================================================
  Files                                  713      713              
  Lines                                93614    93643      +29     
===================================================================
+ Hits                                 58301    58499     +198     
+ Misses                               35313    35144     -169     
Flag Coverage Δ
examples 25.81% <4.54%> (+0.03%) ⬆️
gpu 36.51% <4.54%> (-0.02%) ⬇️
puzzletron 29.62% <100.00%> (-0.10%) ⬇️
regression 8.78% <0.00%> (-0.01%) ⬇️
unit 28.88% <0.00%> (-0.02%) ⬇️

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Actionable comments posted: 3

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Inline comments:
In
`@examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/vlm_quality_evaluation.yaml`:
- Around line 31-39: Extend the vlm_campaign_evaluation mapping to interpolate
dtype, gpu_memory_utilization, max_model_len, limit_mm_per_prompt, and topology
from vlm_quality_evaluation, preserving the complete declared VLM runtime
contract for both evaluation stages.

In `@puzzletron_setup/v2/defaults.py`:
- Around line 126-127: Update the Slurm CPU field validation used by
_validate_leaf so None is accepted only for the optional CPU settings, while
preserving the minimum-of-1 integer validation for all other paths.

In `@tests/unit/torch/puzzletron/test_qwen3p5_0p8b_full_smoke_plan.py`:
- Around line 70-71: Update the stage assertions in both full smoke tests to
first collect CPU-resource stages and assert that the collection is non-empty,
then verify their total_gpus values are 0; retain the existing non-CPU assertion
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📒 Files selected for processing (51)
  • CHANGELOG.rst
  • examples/puzzletron/README.md
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/advanced.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/model.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/quality_evaluation.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/campaign.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/campaign_extended.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/e2e_quality_comparison.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/e2e_quality_comparison_extended.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/e2e_vlm_quality_comparison.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/e2e_vlm_quality_comparison_extended.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/full_smoke_extended.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/full_vlm_smoke.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/mip_vlm_smoke.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/vlm_admitted_axes_lifecycle_smoke.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/vlm_campaign.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/vlm_quality_evaluation.yaml
  • examples/puzzletron/configs/families/qwen3_5/setup_v2_defaults.yaml
  • examples/puzzletron/configs/orchestration/execution.single_gpu.yaml
  • examples/puzzletron/configs/orchestration/qwen3p5_0p8b/execution.campaign.yaml
  • examples/puzzletron/configs/orchestration/qwen3p5_0p8b/execution.vlm_admitted_axes_campaign.yaml
  • examples/puzzletron/configs/orchestration/qwen3p5_0p8b/execution.vlm_campaign.yaml
  • examples/puzzletron/configs/orchestration/qwen3p5_0p8b/runner.slurm.yaml
  • examples/puzzletron/configs/orchestration/runner.slurm.example.yaml
  • examples/puzzletron/configs/setup/defaults.example.yaml
  • examples/puzzletron/docs/mip_profiles.md
  • examples/puzzletron/docs/orchestration_operations.md
  • examples/puzzletron/docs/qwen3p5_0p8b_campaign.md
  • examples/puzzletron/docs/qwen3p5_0p8b_smoke.md
  • examples/puzzletron/docs/qwen3p5_0p8b_vlm_smoke.md
  • examples/puzzletron/docs/qwen3p5_4b_vlm_example.md
  • examples/puzzletron/docs/setup_wizard.md
  • examples/puzzletron/docs/slurm_configuration.md
  • examples/puzzletron/evaluation/vlm/post_mip.py
  • examples/puzzletron/evaluation/vlm/suites.py
  • modelopt/torch/puzzletron/mip/search_space.py
  • puzzletron_setup/bundle.py
  • puzzletron_setup/v2/bundle.py
  • puzzletron_setup/v2/defaults.py
  • puzzletron_setup/v2/resolved.py
  • puzzletron_setup/v2/wizard.py
  • tests/unit/torch/puzzletron/test_mip_search_space.py
  • tests/unit/torch/puzzletron/test_qwen3p5_0p8b_example.py
  • tests/unit/torch/puzzletron/test_qwen3p5_0p8b_full_smoke_plan.py
  • tests/unit/torch/puzzletron/test_qwen3p5_0p8b_full_vlm_smoke_plan.py
  • tests/unit/torch/puzzletron/test_qwen3p5_0p8b_smoke_plan.py
  • tests/unit/torch/puzzletron/test_qwen3p5_0p8b_vlm_smoke_plan.py
  • tests/unit/torch/puzzletron/test_qwen3p5_4b_vlm_example.py
  • tests/unit/torch/puzzletron/test_setup_bundle.py
  • tests/unit/torch/puzzletron/test_setup_v2_quick.py
  • tests/unit/torch/puzzletron/test_setup_v2_resolved_config.py
💤 Files with no reviewable changes (13)
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/full_smoke_extended.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/e2e_vlm_quality_comparison_extended.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/quality_evaluation.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/e2e_quality_comparison.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/e2e_quality_comparison_extended.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/campaign.yaml
  • examples/puzzletron/configs/orchestration/qwen3p5_0p8b/execution.vlm_admitted_axes_campaign.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/e2e_vlm_quality_comparison.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/vlm_admitted_axes_lifecycle_smoke.yaml
  • examples/puzzletron/configs/orchestration/qwen3p5_0p8b/execution.campaign.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/advanced.yaml
  • examples/puzzletron/docs/qwen3p5_0p8b_campaign.md
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/campaign_extended.yaml

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Comment thread puzzletron_setup/v2/defaults.py
Comment thread tests/unit/torch/puzzletron/test_qwen3p5_0p8b_full_smoke_plan.py Outdated
@j-rausch
j-rausch force-pushed the jrausch/qwen35-vlm-campaign-stack branch from 3eb8a9a to 70bc446 Compare September 7, 2026 00:07
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Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
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j-rausch force-pushed the jrausch/qwen35-vlm-campaign-stack branch from 70bc446 to f7dee46 Compare September 7, 2026 09:45

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In
`@examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/vlm_campaign.yaml`:
- Line 69: Update the sharded AIPerf worker and its call to run_aiperf_sweep so
it uses the configured vlm_campaign_aiperf endpoint_type instead of hard-coding
completions, and forwards image_batch_sizes plus the configured image
dimensions. Preserve the chat endpoint and image workload settings for the
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  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/full_vlm_smoke.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/runs/vlm_campaign.yaml
  • examples/puzzletron/configs/families/qwen3_5/qwen3p5_0p8b/vlm_quality_evaluation.yaml
  • examples/puzzletron/docs/qwen3p5_0p8b_vlm_smoke.md
  • examples/puzzletron/docs/slurm_configuration.md
  • tests/unit/torch/puzzletron/test_qwen3p5_0p8b_full_vlm_smoke_plan.py

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Signed-off-by: Johannes Rausch <jrausch@nvidia.com>

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Inline comments:
In `@tests/unit/torch/puzzletron/test_orchestration_lightweight.py`:
- Line 339: Update the assertion in the embedding pruning validation test to
expect the production error text “embedding_pruning.enabled requires at least
one width” for the configured empty widths list, replacing the unrelated
embedding replacement scoring message.

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assert result.returncode == 2
assert "mip.runs must define at least one active named solve" in result.stderr
assert "update the named-MIP configuration" in result.stderr
assert "embedding replacement scoring requires at least one width" in result.stderr

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🎯 Functional Correctness | 🟡 Minor | ⚡ Quick win

Assert the error emitted by the configured validation branch.

The fixture enables embedding_pruning with an empty widths list. The production validation raises embedding_pruning.enabled requires at least one width, but Line 339 checks for embedding replacement scoring requires at least one width. Update the assertion to match the configured validation branch.

Proposed fix
-    assert "embedding replacement scoring requires at least one width" in result.stderr
+    assert "embedding_pruning.enabled requires at least one width" in result.stderr
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Suggested change
assert "embedding replacement scoring requires at least one width" in result.stderr
assert "embedding_pruning.enabled requires at least one width" in result.stderr
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In `@tests/unit/torch/puzzletron/test_orchestration_lightweight.py` at line 339,
Update the assertion in the embedding pruning validation test to expect the
production error text “embedding_pruning.enabled requires at least one width”
for the configured empty widths list, replacing the unrelated embedding
replacement scoring message.

After applying the fix, consider running `coderabbit review --agent` for local
review. Visit https://docs.coderabbit.ai/cli.

Keep distinct evaluator and MIP coverage while moving bundle recovery checks to their focused seam and removing duplicate campaign assertions.

Signed-off-by: Johannes Rausch <jrausch@nvidia.com>
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