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Pull requests: nextflow-io/nextflow

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Pull requests list

Update CI bucket to s3://nextflow-oss-ci [26.04.x backport]
#7549 opened Aug 26, 2026 by jorgee Contributor Loading…
Update CI bucket to s3://nextflow-oss-ci [25.10.x backport]
#7548 opened Aug 26, 2026 by jorgee Contributor Loading…
Report a syntax error for an invalid output or emit assignment lang/processes
#7547 opened Aug 26, 2026 by bentsherman Member Loading…
1
1
Instance flexibility for Google Batch executor/google-batch
#7546 opened Aug 26, 2026 by bentsherman Member • Draft
1
1
Fix S3 directory upload skipping symbolic links [26.04.x backport] storage/aws
#7545 opened Aug 26, 2026 by jorgee Contributor Loading…
1
Fix S3 directory upload skipping symbolic links [25.10.x backport]
#7544 opened Aug 26, 2026 by jorgee Contributor Loading…
1
Honour errorStrategy for container resolution failures software/wave
#7542 opened Aug 26, 2026 by Mohit-Ak • Draft
1
1
Add custom job names for AWS Batch executor/aws-batch
#7538 opened Aug 25, 2026 by CHU4694 Loading…
1
1
Add configurable timeouts to SCM API requests software/git
#7536 opened Aug 24, 2026 by robsyme Collaborator Loading…
2
chore: update dependency org.apache.groovy:groovy-json to v4.0.33
#7534 opened Aug 24, 2026 by seqeralabs-renovate Bot Loading…
1 task
1
chore: update dependency me.sunlan:antlr4 to v4.13.2.15
#7533 opened Aug 24, 2026 by seqeralabs-renovate Bot Loading…
1 task
1
chore: update anthropics/claude-code-action action to v1.0.198
#7532 opened Aug 24, 2026 by seqeralabs-renovate Bot Loading…
1 task
1
chore: pin node.js to v26.7.0
#7531 opened Aug 24, 2026 by seqeralabs-renovate Bot Loading…
1 task
1
Support RFC 4180 escaped quotes in CsvParser
#7530 opened Aug 22, 2026 by AdvaitS Loading…
1
1
Add automatic resource labels for any executor
#7528 opened Aug 21, 2026 by pditommaso Member Loading…
6
Add NXF_CONFIG environment variable for a default config file lang/config
#7526 opened Aug 21, 2026 by AdvaitS Loading…
1
1
Standardise blank lines in the formatter
#7523 opened Aug 21, 2026 by ewels Member • 4/4 Loading…
Support fmt: skip / off / on directives in the formatter
#7522 opened Aug 21, 2026 by ewels Member • 3/4 Loading…
Wrap long lines in the formatter
#7520 opened Aug 21, 2026 by ewels Member • 2/4 Loading…
1
Sort includes when formatting
#7519 opened Aug 21, 2026 by ewels Member • 1/4 Loading…
1
Authorize Claude PR reviews against live collaborator permission
#7504 opened Aug 18, 2026 by ewels Member Loading…
3
Implement resumable staging of foreign files from HTTP sources
#7494 opened Aug 17, 2026 by scwatts Loading…
1
Improve resilience to delayed shared file system visibility
#7489 opened Aug 16, 2026 by pditommaso Member Loading…
4
Do not submit queued tasks after the session has aborted
#7482 opened Aug 15, 2026 by Mohit-Ak • Draft
1
1
Apply the POSIX dot rule to each glob pattern component
#7481 opened Aug 14, 2026 by robsyme Collaborator Loading…
1
1
ProTip! What’s not been updated in a month: updated:<2026-07-26.