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Credit new authors and contributors #100

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2ff37a4
fix render_readme crashing on comp_process_integration
rcannood Aug 13, 2026
9c26aa2
credit missing contributors
rcannood Aug 13, 2026
2789514
Add orcid and fix name
rcannood Aug 13, 2026
8e7984e
Apply suggestion from @stephen-chung-mh
rcannood Aug 13, 2026
4dc93d3
Add pr number to changelog
rcannood Aug 13, 2026
732f889
Merge remote-tracking branch 'origin/main' into chore/credit-missing-…
rcannood Aug 13, 2026
ed7a3b3
Merge branch 'chore/credit-missing-contributors' of github.com:openpr…
rcannood Aug 13, 2026
3666b21
rerender readme
rcannood Aug 13, 2026
4c457ca
add orcid, rerender readme
rcannood Aug 14, 2026
3d40e8b
Merge remote-tracking branch 'origin/main' into chore/credit-missing-…
rcannood Aug 14, 2026
5c0478b
Apply suggestions from code review
rcannood Aug 17, 2026
fd284c5
rerender readme
rcannood Aug 17, 2026
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Original file line number Diff line number Diff line change
Expand Up @@ -31,6 +31,7 @@

* Un-pin the scPRINT version and update parameters (PR #51)
* Update scPRINT to better handle large datasets, including a new default model (PR #54)
* Credit contributors missing from the authors list, and fix Martin Kim's orcid (PR #100).

## Bug fixes

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31 changes: 19 additions & 12 deletions README.md
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Expand Up @@ -46,18 +46,25 @@ extensive benchmark of single-cell data integration methods.

## Authors & contributors

| Name | Roles | Orcid | Github |
|:------------------|:-------------------|:--------------------|:-------------|
| Michaela Mueller | maintainer, author | 0000-0002-1401-1785 | mumichae |
| Malte Luecken | author | 0000-0001-7464-7921 | LuckyMD |
| Daniel Strobl | author | 0000-0002-5516-7057 | danielStrobl |
| Robrecht Cannoodt | author | 0000-0003-3641-729X | rcannood |
| Luke Zappia | author | 0000-0001-7744-8565 | lazappi |
| Scott Gigante | contributor | 0000-0002-4544-2764 | scottgigante |
| Kai Waldrant | contributor | 0009-0003-8555-1361 | KaiWaldrant |
| Martin Kim | contributor | 0009-0003-8555-1361 | martinkim0 |
| Sai Nirmayi Yasa | contributor | 0009-0003-6319-9803 | sainirmayi |
| Jeremie Kalfon | contributor | 0000-0002-2818-9728 | jkobject |
| Name | Roles | Orcid | Github |
|:------------------|:-------------------|:--------------------|:-----------------|
| Michaela Mueller | maintainer, author | 0000-0002-1401-1785 | mumichae |
| Malte Luecken | author | 0000-0001-7464-7921 | LuckyMD |
| Daniel Strobl | author | 0000-0002-5516-7057 | danielStrobl |
| Robrecht Cannoodt | author | 0000-0003-3641-729X | rcannood |
| Luke Zappia | author | 0000-0001-7744-8565 | lazappi |
| Jeremie Kalfon | author | 0000-0002-2818-9728 | jkobject |
| Seo Hyon Kim | author | 0009-0007-3062-4681 | seohyonkim |
| Josep Garnica | author | 0000-0001-9493-1321 | JGarnica22 |
| Daniel Schaffer | author | 0000-0003-3608-152X | schafferde |
| Scott Gigante | contributor | 0000-0002-4544-2764 | scottgigante |
| Kai Waldrant | contributor | 0009-0003-8555-1361 | KaiWaldrant |
| Martin Kim | contributor | | martinkim0 |
| Sai Nirmayi Yasa | contributor | 0009-0003-6319-9803 | sainirmayi |
| Tianyu Liu | contributor | 0000-0002-9412-6573 | HelloWorldLTY |
| Calvin McCarter | contributor | 0000-0002-7257-1350 | calvinmccarter |
| Stephen Chung | contributor | 0009-0009-5833-9721 | stephen-chung-mh |
| Wendao Liu | contributor | 0000-0002-5124-9338 | liuwd15 |

## API

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42 changes: 38 additions & 4 deletions _viash.yaml
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Expand Up @@ -71,6 +71,26 @@ authors:
info:
github: lazappi
orcid: 0000-0001-7744-8565
- name: Jeremie Kalfon
roles: [author]
info:
github: jkobject
orcid: 0000-0002-2818-9728
- name: Seo Hyon Kim
roles: [author]
info:
github: seohyonkim
orcid: 0009-0007-3062-4681
- name: Josep Garnica
roles: [author]
info:
github: JGarnica22
orcid: 0000-0001-9493-1321
- name: Daniel Schaffer
roles: [author]
info:
github: schafferde
orcid: 0000-0003-3608-152X
- name: "Scott Gigante"
roles: [ contributor ]
info:
Expand All @@ -85,17 +105,31 @@ authors:
roles: [ contributor ]
info:
github: martinkim0
orcid: "0009-0003-8555-1361"
- name: Sai Nirmayi Yasa
roles: [contributor]
info:
github: sainirmayi
orcid: 0009-0003-6319-9803
- name: Jeremie Kalfon
- name: Tianyu Liu
roles: [contributor]
info:
github: jkobject
orcid: 0000-0002-2818-9728
github: HelloWorldLTY
orcid: 0000-0002-9412-6573
- name: Calvin McCarter
roles: [contributor]
info:
github: calvinmccarter
orcid: 0000-0002-7257-1350
- name: Stephen Chung
roles: [contributor]
info:
github: stephen-chung-mh
Comment thread
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orcid: 0009-0009-5833-9721
- name: Wendao Liu
roles: [contributor]
info:
github: liuwd15
orcid: 0000-0002-5124-9338
config_mods: |
.runners[.type == "nextflow"].config.labels := { lowmem : "memory = 20.Gb", midmem : "memory = 50.Gb", highmem : "memory = 100.Gb", lowcpu : "cpus = 5", midcpu : "cpus = 15", highcpu : "cpus = 30", lowtime : "time = 1.h", midtime : "time = 4.h", hightime : "time = 8.h", veryhightime : "time = 24.h" }

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