fix(deps): update dependency scipy-stubs to >=1.18.1.0,<2 - #11
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This PR contains the following updates:
>=1.11,<2→>=1.18.1.0,<2Test plan: CI should pass with updated dependencies. No review required: this is an automated dependency update PR.
Release Notes
scipy/scipy-stubs (scipy-stubs)
v1.18.1.0Compare Source
This scipy-stubs release comes with many improvements and even more fixes. It targets SciPy 1.18.1 and supports Python 3.12–3.15, NumPy 2.0–2.7, and optype 0.15–0.19.
🏆 Release Highlights
linalg.blas&linalg.lapackcomplete type coverageWhat's Changed
⏬ SciPy Changes
spatial.tsearch: update deprecation target version to match upstream by @jorenham in #2160sparse._sputils.get_sum_dtype(private): update return type for SciPy 1.18.1 by @jorenham in #2267linalg.bandwidth: restoreintreturn types for SciPy 1.18.1 by @jorenham in #2268stats.binomtest: restoreinttypes of returnedkandnfor SciPy 1.18.1 by @jorenham in #2269✨ Improvements
linalg.pinv[h]: improved shape-typing and dtype propagation by @jorenham in #1997linalg.matrix_balance: improved shape-typing and dtype propagation by @jorenham in #1998linalg.matmul_toeplitz: improved shape-typing and dtype propagation by @jorenham in #1999linalg: improved matrix function shape-typing and dtype propagation by @jorenham in #2000linalg._batched_linalg: add missing private function stubs by @jorenham in #2021interpolate._interpnd: stub_ndim_coords_from_arraysby @jorenham in #2024sparse.csgraph._flow: stub private functions by @jorenham in #2027_lib._ccallback_c: ctypes declaration stubs by @jorenham in #2028stats: improvettest_1sampby @jorenham in #2044stats: improvekstestby @jorenham in #2045stats: improveks_1sampby @jorenham in #2046stats: improveranksumsby @jorenham in #2047stats: improvettest_ind_from_statsby @jorenham in #2048stats: improvepointbiserialrby @jorenham in #2050stats: improvefriedmanchisquareby @jorenham in #2051stats: improvealexandergovernby @jorenham in #2052stats: improved binned statistic function by @jorenham in #2054linalg: improveeigvalsandeigvalshby @jorenham in #2055linalg: improvehessenbergby @jorenham in #2056linalg: improveeigvals_bandedby @jorenham in #2057linalg: improveeigvalsh_tridiagonalby @jorenham in #2058linalg: improveeig_bandedby @jorenham in #2059linalg: improveeigh_tridiagonalby @jorenham in #2060linalg: improveeighby @jorenham in #2061linalg: improveeigby @jorenham in #2062linalg: improveqrby @jorenham in #2063linalg: improvenormby @jorenham in #2064linalg: improverqby @jorenham in #2065special.factorial: improved return dtype accuracy by @jorenham in #2080special.factorial2: improved return dtype accuracy by @jorenham in #2081special.factorialk: improved return dtype accuracy by @jorenham in #2082linalg: improve return dtypes ofqzandordqzby @jorenham in #2089linalg: improve return dtypes ofldlby @Aniketsy in #2029linalg.solve_sylvester: improve return dtypes by @jorenham in #2091linalg.solve_{continuous,discrete}_lyapunov: improve return dtypes by @jorenham in #2092linalg.solve_{continuous,discrete}_are: improve return dtypes by @jorenham in #2094sparse.csgraph.laplacian: improve return dtypes by @jorenham in #2095stats.mstats.tmean: improve shape-typing and return dtypes by @jorenham in #2098stats.mstats.spearmanr: improve shape-typing and return dtypes by @jorenham in #2099stats.mstats.normaltest: improve shape-typing and return dtypes by @jorenham in #2100stats.mstats.moment: improve shape-typing and return dtypes by @jorenham in #2101stats.mstats.{variation,skew,kurtosis}: improve shape-typing and return dtypes by @jorenham in #2102stats.mstats.trim: improve shape-typing and return dtypes by @jorenham in #2103stats.mstats.trimmed_mean: improve shape-typing and return dtypes by @jorenham in #2104stats.mstats.describe: improve shape-typing and return dtypes by @jorenham in #2105stats.mstats.linregress: improve shape-typing and return dtypes by @jorenham in #2106stats.mstats.{theil,siegel,sen_seasonal_}slopes: improve result types by @jorenham in #2107stats.mstats.hdquantiles: improve shape-typing and return dtypes by @jorenham in #2117stats.mstats.ks_2samp: improve shape-typing and return dtypes by @jorenham in #2118stats.mstats.friedmanchisquare: improve input signature by @jorenham in #2120stats.mstats.trimboth: improve shape-typing and return dtypes by @jorenham in #2123stats.mstats.hdmedian: improve shape-typing and return dtypes by @jorenham in #2124stats.mstats.trimmed_mean_ci: improve shape-typing and return dtypes by @jorenham in #2125stats.mstats.mjci: improve shape-typing and return dtypes by @jorenham in #2126stats.mstats.mquantiles_cimj: improve shape-typing and return dtypes by @jorenham in #2127stats.mstats.median_cihs: improve shape-typing and return dtypes by @jorenham in #2128stats.mstats.idealfourths: improve shape-typing and return dtypes by @jorenham in #2129stats.mstats.compare_medians_ms: improve shape-typing and return dtypes by @jorenham in #2130stats.mstats.hdquantiles_sd: improve shape-typing by @jorenham in #2131stats.mstats.trimtail: improve shape-typing and return dtypes by @jorenham in #2132stats.mstats.kstest: improve shape-typing and return dtypes by @jorenham in #2133stats.mstats.winsorize: improve shape-typing and return dtypes by @jorenham in #2135stats.mstats.rankdata: improve shape-typing and return dtypes by @jorenham in #2136stats.mstats.trimmed_std: improve shape-typing and return dtypes by @jorenham in #2138stats.mstats.trimmed_stde: improve shape-typing and return dtypes by @jorenham in #2140stats.mstats.tvar: improved input signature and return type by @jorenham in #2141stats.mstats.tsem: improve return type by @jorenham in #2142stats.mstats.{trima,trimr}: improve shape-typing and return dtypes by @jorenham in #2143stats.mstats.ks_1samp: improve shape-typing and return dtypes by @jorenham in #2144stats.mstats.brunnermunzel: also accept complex input by @jorenham in #2145stats.mstats.{tmin,tmax}: improve shape-typing and return dtypes by @jorenham in #2146stats.mstats.sem: improve shape-typing and return dtypes by @jorenham in #2148stats.mstats.plotting_positions: improve shape-typing by @jorenham in #2149stats.mstats.obrientransform: improve shape-typing by @jorenham in #2150stats.mstats.scoreatpercentile: improve shape-typing and return dtypes by @jorenham in #2151stats.mstats.msign: improve shape-typing and return dtypes by @jorenham in #2152stats.mstats.find_repeats: improve shape-typing by @jorenham in #2153stats.mstats.argstoarray: improve shape-typing by @jorenham in #2154spatial.KDTree.query: shape-dependent return types by @jorenham in #2159stats.sampling.RatioUniforms: fixpdfcallable andrvsshape-typing by @jorenham in #2166interpolate.interp1d(legacy): generic dtype parameter by @jorenham in #2171ndimage.label: narrow return dtype whenoutput=None(default) by @jorenham in #2173stats: improve.rvs()return type of simple continuous distributions by @jorenham in #2174stats.wilcoxon: improve return types by @jorenham in #2175linalg.polar: improve return dtypes by @jorenham in #2196stats.ecdf: longdouble support by @jorenham in #2197stats.yeojohnson: longdouble support by @jorenham in #2198linalg._decomp_qr: improve return dtypes by @jorenham in #2202sparse.kron: batching support by @jorenham in #2203sparse:fmt-dependentrandom_array/randomreturn types by @jorenham in #2208integrate.solve_ivp: gradualt_eventsandy_eventsunion type by @jorenham in #2213optimize.fsolve: markfull_output=Trueinfodictnjevkey as not required by @jorenham in #2223stats.bws_test: improved shape-typing and dtype propagation by @jorenham in #2238stats.fit: narrowFitResult.paramstuple element types by @jorenham in #2245linalg.lapack: complete type coverage by @jorenham in #2262linalg.blas: complete type coverage by @jorenham in #2263linalg.get_lapack_funcs: overloads for single/multiplenamesby @jorenham in #2270optimize.minimize: add more method-dependent result keys by @jorenham in #2272optimize.root: add more method-dependent result keys by @jorenham in #2273differentiate: improve return type for vectorized functions by @jorenham in #2278sparse.csgraph.maximum_bipartite_matching: narrow the return dtype by @jorenham in #2283sparse.linalg.LaplacianNd.tosparse: improved return type by @jorenham in #2284spatial.distance.seuclidean: narrow return type tonp.float64by @jorenham in #2289cluster.hierarchy.dendrogram:"leaves"is neverNoneby @jorenham in #2290linalg: basic solvers propagatef32andc64by @jorenham in #2297🐛 Fixes
io: fixnetcdf_variable.getValuereturn type by @jorenham in #1990io.MatFile5Reader: fix.read_file_header().__header__and.get_variables()return types by @jorenham in #1991stats.sampling.FastGeneratorInversion: fix.qrvs()return type forsize=(1,)by @jorenham in #1992stats.multivariate_normal: fix[log]{pdf,.cdf}shape-typing by @jorenham in #1994sparse: fix.multiplymethod by @jorenham in #1995ndimage:labeled_comprehensionignoresout_dtypewhenindex=None; rejectlabels=Nonewith non-Noneindexby @Aniketsy in #1993signal.envelope: fix result type whenresidual=Noneby @jorenham in #2002ndimage: fix measurement functions overloads by @jorenham in #2003optimize.leastsq: fixfull_output=True2nd return type by @jorenham in #2004show_config: add missing"blas"and"lapack"depedency dict keys by @jorenham in #2019special._gufuncs: fix typo in private_poisson_binom_pmfufunc name by @jorenham in #2020optimize._direct: fix parameter types of the privatedirectlow-level function by @jorenham in #2022spatial.transform._rotation_cy: fix internalidentityandrandomfallback overloads for intedeterminateshapeby @jorenham in #2023interpolate._rbfinterp_pythran: fix names of functions by @jorenham in #2025stats._stats_pythran: fix internal function signatures and add missing private function stubs by @jorenham in #2026special: fix ufuncfloat32promotion issues by @jorenham in #2053signal: fix typo indetrendparam string literal types by @jorenham in #2073signal: remove incorrectabcmetaclasses from LTI types by @jorenham in #2075io: remove fictitiousABCMetaand@abstractmethods by @jorenham in #2076optimize.GenericBroyden: remove fictitiousABCMetaby @jorenham in #2077sparse: remove fictitious@abstractmethodfrom_spbaseby @jorenham in #2078interpolate: fix return types of{pchip,barycentric}_interpolatefor certain inputs by @jorenham in #2079special.factorial: improved return dtype accuracy by @jorenham in #2080special.factorial2: improved return dtype accuracy by @jorenham in #2081special.factorialk: improved return dtype accuracy by @jorenham in #2082sparse.linalg.eigs[h]: propagatefloat32/complex64by @jorenham in #2096sparse.linalg.norm: propagatefloat32/complex64by @jorenham in #2097stats.mstats.{kendalltau,pointbiserialr}: fix result value types by @jorenham in #2108stats.mstats.pearsonr: fix return type by @jorenham in #2109stats.mstats.mquantiles: fix return type by @jorenham in #2110stats.mstats.mode: fix return type by @jorenham in #2111stats.mstats.{skew,kurtosis}test: fix return type by @jorenham in #2113stats: Fixrelative_risk confidence_interval()return type for degenerate case by @mirl0w in #2112stats.mstats.ttest_*: fix return type by @jorenham in #2114stats.mstats.rsh: fix return type by @jorenham in #2115stats.mstats.kruskal: fix input arity by @jorenham in #2116stats.mstats.f_oneway: fix input arity by @jorenham in #2119stats.sampling: several fixes for the sample method classes by @jorenham in #2167interpolate.UnivariateSpline: accept scalar input by @jorenham in #2170optimize.differential_evolution: accept more validboundstypes by @jorenham in #2172optimize.direct: accept more validboundstypes by @jorenham in #2176stats.fisher_exact: broaden input type to also accept real array-likes by @jorenham in #2177sparse: fix sparse array/matrix issues whendtypeis given by @jorenham in #2178sparse.csgraph: accept scalarindicesby @jorenham in #2179optimize.shgo: accept more validboundstypes by @jorenham in #2180stats.weightedtau: acceptrank=Noneby @jorenham in #2181stats.gaussian_kde: fix.datasetdtype by @jorenham in #2182sparse.trace: fixbool | int8upcasting by @jorenham in #2183sparse: fix.sumsparsebool | int8propagation by @jorenham in #2184sparse: fix.meansub-float dtype promotions by @jorenham in #2185spatial.Rectangle: fix distance method return types by @jorenham in #2186ndimage.value_indices: propagateintegerscalar types by @jorenham in #2187signal.windows.dpss: fix return type whenreturn_ratios=Trueorxp=npby @jorenham in #2188optimize.brute: fix return type forN==1withfinish=Noneby @jorenham in #2189optimize.minimize: propagatefunscalar type by @jorenham in #2190stats.quantile: propagate all floating scalar types by @jorenham in #2191special: fixfloatreturn type of some orthopoly functions by @jorenham in #2192stats.sampling.FastGeneratorInversion.evaluate_error: fix return type whenx_error=Falseby @jorenham in #2193stats.contingency.chi2_contingency: return typedofattr can befloatby @jorenham in #2194signal: fix dtype issues in some IIR functions by @jorenham in #2199stats.monte_carlo_test: propagate non-float64 floating dtypes by @jorenham in #2200stats.norm: propagatefloc/fscaledtypes by @jorenham in #2201stats: propagate non-f64 floating dtypes inbootstrapandpermutation_testby @jorenham in #2204stats.rv_continuous.stats: fix typo inmomentsparameter name by @jorenham in #2206linalg.norm: fix return type whenaxisis given andkeepdims=Falseby @jorenham in #2207signal: accept array-likes forwindowparams of certain spectrai functions by @jorenham in #2209signal.zpk2{tf,sos}: accept complex input by @jorenham in #2210signal.freq{s,z}_zpk: fix input type ofkby @jorenham in #2211interpolate.interpn: acceptmethod="splinef2d"andfill_value=Noneby @jorenham in #2212optimize.root_scalar: accept 1d array-likes forbracketby @jorenham in #2214optimize.minimize_scalar: accept 1d array-likes forboundsandbracketby @jorenham in #2215optimize.minimize: accept 2d array-likes forboundsby @jorenham in #2216fftpack: acceptn: intby @jorenham in #2217spatial.SphericalVoronoi: annotate missingverticesandregionsattributes by @jorenham in #2218spatial.transform.Rotation.create_group: broaden input types and fix output shape by @jorenham in #2219spatial.transform.cKDTree.query: fixintreturn type by @jorenham in #2220special: fix ufunc f32 co-promotion by @jorenham in #2221optimize.line_search: fix last return type by @jorenham in #2222optimize.differential_evolution: fixjacresult attribute type by @jorenham in #2224optimize: fixleast_squares/lsq_lineardtype ofactive_maskin certain cases by @jorenham in #2225optimize: accept 1d array-likes forbrackinbrentandgoldenby @jorenham in #2226optimize.newton: accept 1dSequenceforx0by @jorenham in #2227optimize.elementwise: fix*_minimizereturned bracket tuple type by @jorenham in #2228optimize.minimize: fixcsr_arraydtype ofjacresult whenmethod="trust-constr"by @jorenham in #2229integrate.quad: fix info dict dtypes whenfull_output=Trueby @jorenham in #2230integrate.OdeSolver.dense_output: fix return type by @jorenham in #2231interpolate.BivariateSpline: fixtck[2]type by @jorenham in #2232sparse.linalg.expm_multiply: return sparse ifBis sparse by @jorenham in #2233sparse.linalg.spsolve: return sparse ifbis sparse by @jorenham in #2234sparse.coo_array.count_nonzero: add missingaxisoverload by @jorenham in #2235sparse.linalg.SuperLU,solve: missingtransmethod param by @jorenham in #2236stats: fix{epps_singleton, cramervonmises}_2sampreturn types by @jorenham in #2237stats:rv_continuous.rvsandrv_discrete.rvsshould acceptsize=Noneby @jorenham in #2239stats: fix return dtype ofrv_sample.rvsby @jorenham in #2240stats: fix incorrect return type of new distribution arithmetic by @jorenham in #2243stats: fixrv_continuous.fitcallable type ofoptimizerby @jorenham in #2244spatial.distance: add missing"matching"literal value by @jorenham in #2246spatial.cKDTree.count_neighbors: fix scalar return type by @jorenham in #2247spatial.transform.Rotation.reduce: fix return type whenreturn_indices=Trueby @jorenham in #2248cluster.vq: return 1d output for 1d input by @jorenham in #2249io.mm*: add missing"unsigned-integer"literal forfieldby @jorenham in #2250ndimage.label: accept dtype-likeoutputby @jorenham in #2251ndimage.distance_transform_*: fixindicestype whenreturn_indices=Trueby @jorenham in #2252linalg.expm_frechet: fix return type whencompute_expm=Falseby @jorenham in #2253linalg.cossin: fix return type for complex input by @jorenham in #2254linalg.pascal: returnuint64instead ofint64whenexact=Trueby @jorenham in #2255signal.order_filter: accept floatdomainmask by @jorenham in #2256optimize.dual_annealing: return specializedOptimizeResultby @jorenham in #2257stats.median_abs_deviation: fix return type whenaxis=Noneby @jorenham in #2258optimize.minimize: fix.nfevtype whenmethod="COBYLA"by @jorenham in #2259linalg.blas.find_best_blas_type: fix return type literal forfloat64by @jorenham in #2265interpolate: accept scalar input to bivariate splines and fix scalar output shape-type whengrid=Falseby @jorenham in #2266optimize.elementwise: result attributes can be scalar by @jorenham in #2274optimize.LbfgsInvHessProduct.rho: should be 1d, not scalar by @jorenham in #2275integrate.odeint: accept array-like{r,a}tolby @jorenham in #2276integrate.romb: missingshowparam for 1d overload by @jorenham in #2277interpolate.NdBSpline: fixcdtype for complex input by @jorenham in #2279sparse.linalg.lobcpg: fix returned history list element types by @jorenham in #2280sparse.linalg.matrix_power: fix return types whenpoweris0or1by @jorenham in #2282stats: add missingrv_frozen.expectparameters by @jorenham in #2285stats.gaussian_kde: propagatelongdoubleby @jorenham in #2286stats.multivariate_normal.rvs: accept scalarmeanwhensize > 1by @jorenham in #2287stats.wasserstein_distance_nd: return barefloatfor 1d input (notfloat64) by @jorenham in #2288linalg.interpolative.interp_decomp: fix return type by @jorenham in #2291linalg.funm: fix 2nd return type whendisp=Falseby @jorenham in #2293signal.{sawtooth, square}: propagate allfloatingdtypes by @jorenham in #2295special.ellip_*: accept array-like input by @jorenham in #2296stats.rankdata: propagate non-f64 floating input by @jorenham in #2298stats.linregress: propagate float32 by @jorenham in #2299↪️ Compatibility
stats:rvsfallback overloads for compatibility with legacy type-checkers by @jorenham in #2005sparse:*_array[Any].sum()workaround for mypy's and pyright's overload selection bugs by @jorenham in #2158signal.[d]lti: add__init__for compatibility with pyrefly and ty by @jorenham in #2205📝 Documentation
scipy.interpolategeneric signature table scipy versions by @jorenham in #1985✅ Testing
10 pull requests
stats: add test coverage forargstoarrayby @Aniketsy in #2001sparse: add test coverage for_bsr.pyiby @Aniketsy in #1734stats.qmc: add test coverage forHaltonby @Aniketsy in #2006stats: add test coverage forchisquareby @Aniketsy in #2083mstatsre-exports ofscipy.statsfunctions from test coverage by @jorenham in #2088stats.mstats: add test coverage forkruskalby @Aniketsy in #2087stats.mstats.mannwhitneyu: type-tests by @jorenham in #2122stats.qmc: increase test coverage by @jorenham in #2165stats.sampling: increase test coverage by @jorenham in #2168🧹 Maintenance
43 pull requests
stubdefaulterrev to866eccaby @jorenham in #1984stats._distn_infrastructure: improve type coverage of private API by @jorenham in #2030integrate._ivp.rk: improve private API coverage by @jorenham in #2031interpolate._fitpack_repro: improve private API coverage by @jorenham in #2032optimize._differentiable_functions: improve private API coverage by @jorenham in #2033optimize._trustregion_exact: improve private API coverage by @jorenham in #2034tyto0.0.64by @jorenham in #2068stats._mstats_basic.stde_median: mark as undocumented by @jorenham in [#2137](https://redirect.github.com/scipConfiguration
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